Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----------------------------MLVYIGNGHYCYSNSTAMFLSSIGENVSPQLVEILTGVGL----------GAMIEYEKNLYFSMRDPDDGINYALNILGFT---AEEHQQASDLDDPFPLLKQQIKQNPVILGPLDMGELTYHPNHKNLNGSDHYVLGYQM------------DNENIYVQDPAGFPFVPLS------LDQFKKAWMAERIPYRK-----------GINKYWSTAKKVVTLDNNEIYERAIDYFKRTYRKFEKVDIGLIGREAICFYADQLLNAPITADTIRHTTFFLFQLSARRANDYA--MYFKDRHSHLSVLKTEQAKVFGICHSMSVNKDWKGISEKLMKLADLEDNFRLELLKVGY
4K7J Chain:A ((26-375))GLLTDYGNASASPWMKKLQSVAQGSGETFRILQIGDSHTAGDFFTDSLRKRLQKTWGD------GGIGWVYPANVKGQRMAAVRHNGNWQSLTSRNNTGDFPLGGILAHTGSGGSMTLTASDGIAS----KQRVSLFAKPL--LAEQTLTVNGNTVSANGGGWQVLDTGAALPLTIHTEMPWDIGFINIENPAGGITVSAMGINGAQLTQWSK-WRADRMNDLAQTGADLVILSYGTNEAFNN-----NIDIADTEQKWLDTVRQIRDSLPAAGILIIG-------APESLKNTLGVCGTRPVRLTEVQQMQRRVARQGQTMFWSWQNAMGGICSMKNWLNQGWAAKDGVHFSAKGYRRAAEMLADSLEELVRSA-----


General information:
TITO was launched using:
RESULT:

Template: 4K7J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1532 37154 24.25 134.13
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : 24.25
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.240

(partial model without unconserved sides chains):
PDB file : Tito_4K7J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4K7J-query.scw
PDB file : Tito_Scwrl_4K7J.pdb: