Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDIRTITSSDYEMVTSVLNEWWGGRQLKEKLPRLFFEHFQDTSFITSEHNSMTGFLIGFQSQSDPETAYIHFSGVHPDFRKMQIGKQLYDVFIETVKQRGCTRVKCVTSPVNKVSIAYHTKLGFDIEKGTKTVNGISVFANYDG-P--GQDRVLFVKNI
2CNT Chain:A ((2-145))NTISILSTTDLPAAWQIEQRAHAFPWSEKTFFGN--QGERYLNLKLTADDRMAAFAITQVV---LDEATLFNIAVDPDFQRRGLGRMLLEHLIDELETRGVVTLWLEVRASNAAAIALYESLGFNEAT---------IRRNYYPTAQGHEDAIIMALP-


General information:
TITO was launched using:
RESULT:

Template: 2CNT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 612 -80217 -131.07 -568.91
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -131.07
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.599

(partial model without unconserved sides chains):
PDB file : Tito_2CNT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2CNT-query.scw
PDB file : Tito_Scwrl_2CNT.pdb: