Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSIATEAVMKQEVYQVNGMNLWYGQHHALKNINLSIYENEVTAIIGPSGCGKSTFIKTLNLMIQMTPNVKLAGELNYNGSNILKDKVDIVDL----RKNIGMVFQKGNPFPQ-SIFDNVAYGPRVHGTKNKKKLQEIVEKSLKDVALWDEVKDRLHTSALS-LSGGQQQRLCIARALATNPDILLMDEPTSALDPISTRKIEELILEL--KDKYTIVIVTHNMQQAARVSDQTAFFYMGELVECDNTNKMFSNPKDQRTLDYISGKFG
3TIF Chain:B ((19-223))--------------------------YALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPT-----EGEVYID--NIKTNDLDDDELTKIRRDKIGFVFQQFNLIPLLTALENVEL-PLIFKYRGAMSGEERRKRALECLKMA-ELEERFANHKPNQLSGGQQQRVAIARALANNPPIILADQPTWALDSKTGEKIMQLLKKLNEEDGKTVVVVTHDI-NVARFGERIIYLKDGEV---------------------------


General information:
TITO was launched using:
RESULT:

Template: 3TIF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 953 -15316 -16.07 -77.75
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain B : 0.74

3D Compatibility (PKB) : -16.07
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.500

(partial model without unconserved sides chains):
PDB file : Tito_3TIF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TIF-query.scw
PDB file : Tito_Scwrl_3TIF.pdb: