Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MADCDSVTNSPLATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPTG-TGRGGP---GYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITIS
1XQ7 Chain:C ((20-160))
-----------------------GRVVIGLFGNDVPKTVENFKQLASG------ENGFG------YKGSIFHRVIRNFMIQGGDFTNFDGTGGKSIYGTRFDDENLKIKHFVGA--VSMANAGPNSNGSQFFVTTAPTPWLDGRHVVFGKVV--EGMDVVKKVENTKTGLNDKPKKAVKI------
General information:
TITO was launched using:
RESULT:
Template:
1XQ7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38612 for 1009 contacts (-38.3/contact) +
2D Compatibility (PS) -14832 + (NN) -10310 + (LL) 1760
1D Compatibility (HY) -10400 + (ID) 3550
Total energy: -75944.0 ( -75.27 by residue)
QMean score : 0.610
(partial model without unconserved sides chains):
PDB file :
Tito_1XQ7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XQ7-query.scw
PDB file :
Tito_Scwrl_1XQ7.pdb
: