Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -----MRLTHP-TPCP-ENGETMIDRRRSAWRFSVPLVCLLA-GLLLAAT-HGVSGG-TEIRRSDAPRLVDLVRRAQASVNRLATEREALTTRIDSVHGRSVDTALAAMQRRSAKLAGVAAMNPVHG-PGLVVTLQDAQRDANGRFPRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLLNGRTYSPPYTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDLQ----IVGYADP-VRMHFAQPAGPLDY |
4G3A Chain:A ((5-231)) | KPSDLDGFIQQMPKADMRVKVQLAEDLVTFLSDDTNSIVCTDMGFLIDGLMPWLTGSHFKIAQKSLEAFSELIKRLGSDFNAY--TATVLPHVIDRL-GDSRDTVREKAQLLLRDL-----------MEHRVLPPQALIDKLATSCFKH---KNAKVREEFLQTIVNALHEYGTQQLSV----------------------RVYIPPVC-ALLGDPTVNVREAAIQTLVEIYKHV--------GDRLRPDLRRMDDVPASKLAMLEQKFDQVKLE--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4G3A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -54211 for 1566 contacts (-34.6/contact) +
2D Compatibility (PS) -22539 + (NN) -7283 + (LL) 3424
1D Compatibility (HY) -8400 + (ID) 2000
Total energy: -91009.0 ( -58.12 by residue)
QMean score : 0.236
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