Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGEFDPKLRFAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKTTQRLRRLANLEHNPRASVLVDSYADD-------WTQLWWVRADGVAAIHRDGEVMRAAYRLLRAKYAQY-QS----VPLNGPVIAIAVQRWASWHA
2FG9 Chain:A ((27-169))
-DKQRIESIILQADACFVGITDLEGNPYVVPMNFGYEND---------TLYLHSG------PEGGKIEMLQRNNNVCITFSLGHKLVYQHCSYSMRSESAMCRGKVEFIEDMEEKRHALDIIMRHYTKDQFSYSDPAVRNVKVWKVPVDQMTGKV-
General information:
TITO was launched using:
RESULT:
Template:
2FG9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67964 for 884 contacts (-76.9/contact) +
2D Compatibility (PS) -14119 + (NN) -4833 + (LL) 1128
1D Compatibility (HY) -800 + (ID) 950
Total energy: -87538.0 ( -99.02 by residue)
QMean score : 0.408
(partial model without unconserved sides chains):
PDB file :
Tito_2FG9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FG9-query.scw
PDB file :
Tito_Scwrl_2FG9.pdb
: