Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLEVSFKMRPAQPR
2V18 Chain:G ((3-65))
--VYKKVELVGTSEEGLEAAIQAALARARKTLRHLDWFEVKEIRGTIGEAGVKEYQVVLEVGFRL------
General information:
TITO was launched using:
RESULT:
Template:
2V18.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19732 for 399 contacts (-49.5/contact) +
2D Compatibility (PS) -7143 + (NN) -5115 + (LL) 364
1D Compatibility (HY) -5600 + (ID) 1050
Total energy: -38276.0 ( -95.93 by residue)
QMean score : 0.669
(partial model without unconserved sides chains):
PDB file :
Tito_2V18.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2V18-query.scw
PDB file :
Tito_Scwrl_2V18.pdb
: