Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRVLLTGAAGFIGSRVDAALRAAGHDVVGVDALLPAAHGPNPVLPPGCQRVDVRDASALAPLLA--GVDLVCHQAAMVGAGVNAADAPAYGGHNDFATTVLLAQMFAAGVRRLVLASSMV-VYGQGRYDCPQHGPVDPLPRRRADLDNGVFEHRCPGCGEPVIWQLVDEDAPLRPRSLYAASKTAQEHYALAWSEASGGSVVALRYHNVYGPGMPRDTPYSGVAAIFRSAVEKGKPPKVFEDGGQMRDFVHVDDVAAANLAAVHLGEADRDGFTAVNVCSGRPISILQVATAICDARGGSMSPAITGHYRSGDVRHIVADPARAARVLGFRAAVDPGEGLREFAFAPLR |
| 4ZRM Chain:A ((4-306)) | MNILVTGGAGFIGSHVVDKLIENGYGVIVVDNLSSGKVE-NLNRNALFYEQSIEDEEMMERIFSLHRPEYVFHLAAQASVAISVREPARDAKTNIIGSLVLLEKSIKYGVKKFIFSSTGGAIYGENVK-----------------------------------VFPTPETEIPHPISPYGIAKYSTEMYLEFFAREYGLKYTVLRYANVYGPRQDPYGE-AGVVAIFTERMLRGEEVHIFGDGEYVRDYVYVDDVVRANLLAME---K--GDNEVFNIGTGRGTTVNQLFKLLKEITGYDKEPVYK-PPRKGDVRKSILDYTKAKEKLGWEPKVSLEEGLKLTVEY--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ZRM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -181537 for 2677 contacts (-67.8/contact) +
2D Compatibility (PS) -32837 + (NN) -13686 + (LL) 528
1D Compatibility (HY) -14400 + (ID) 4350
Total energy: -246282.0 ( -92.00 by residue)
QMean score : 0.488
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