Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRRMGDASLTTELGRVLVTGGAGFVGANLVTTLLDRG--HWVRSFDRAPSL---L--PA---HPQLEVLQGDITDADVCAAAVD--GIDTIFHTAAIIELMGGASVTDEYRQRSFAVNVGGTENLLHAGQRAGVQRFVYTSSNSVVMGGQNIAGGDETLPYTDRFNDLYTETKVVAERFVLAQNGVDGMLTCAIRPSGIWGNGDQT--MFRKLFESVLKGHVKVLVGRKSARLDNSYVHNLIHGFILAAAHLVPDGTAPGQAYFINDAEPINMFEFARPVLEACGQRWPKMRI-SGPAVRWVMTGWQRLHFRFGFPAPLLEPLAVERLYLDNYFSIAKARRDLGYEPLFTTQQALTECLPYYVSLFEQMKNEARAEKTAATVKP |
| 4EGB Chain:A ((24-341)) | -------------AMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQVIVNFAAES-------------IPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEETPLA--PNSPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHK-----GRVGEVYNIGGNNEKTNVEVVEQIITLLGKTKKD--IEYVT-----------------D-----------GHDRRYAINAEKMKNEFDWEPKYTFEQGLQETVQWYEKNEEWW--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EGB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161040 for 2461 contacts (-65.4/contact) +
2D Compatibility (PS) -30849 + (NN) -11746 + (LL) 5688
1D Compatibility (HY) -8400 + (ID) 3100
Total energy: -209447.0 ( -85.11 by residue)
QMean score : 0.432
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