Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRYPLGEALLALYRWRGPLINAGVGGHGYTYLLGAEANRFVFANA-DAFSWSQTFE-SLVPVDGPTALIVSDGADHRRRRSVVAPGLRHHHVQRYVATMVSNIDTVIDGWQP-------GQRLDIYQELRSAVRRSTAESLFGQRLAVHS-DFLGEQLQPLLDLTRRPPQVMRLQQRVNSPGWRRAMAARKRIDDLIDAQIADARTAP-RPDDHMLTTLISGCSEE-GTTLSDNEIRDSIVSLITAGYETTSGALAWAIYALLTVPGTWESAASEVARVLGGR--VPAADDLSALTYLNGVVHETLRLYSPGVISARRVLRDLWF--DGHRIRAGRLLIFSAYVTHRLPEIWPEPTEFRPLRWDPNAADY--------------RKPAPHEFIPFSGGLHRCIGAVMATTEMTVILARLVARAMLQLPAQRTHRIR--AANFAALRPWPGLTVEIRKSAPAQ |
| 4LXJ Chain:A ((74-528)) | --MKPYEFFEECQKKYGDIFSFVLLGRVMTVYLGPKGHEFVFNAKLADVSAEAAYAHLTTPVFGKGVIYDCPNSRLMEQKKFVKGALTKEAFKSYVPLIAEEVYKYFRDSKNFRLNERTTGTIDVMVTQPEMTIFTASRSLLGKEMRAKLDTDFAYLYSDLDKGFTP--INFVFPN-LPLEHYRKRDHAQKAISGTYMSLIKERRKNNDIQDRDLIDSLMKNSTYKDGVKMTDQEIANLLIGVLMGGQHTSAATSAWILLHLAERPDVQQELYEEQMRVLDGGKKELTYDLLQEMPLLNQTIKETLRMHHPLHSLFRKVMKDMHVPNTSYVIPAGYHVLVSPGYTHLRDEYFPNAHQFNIHRWNNDSASSYSVGEEVDYGFGAISKGVSSPYLPFGGGRHRCIGEHFAYCQLGVLMSIFIRTLKWHYP--EGKTVPPPDFTSMVTLPTGPAKIIWEKRNPEQ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4LXJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -249804 for 3525 contacts (-70.9/contact) +
2D Compatibility (PS) -45091 + (NN) -20328 + (LL) 392
1D Compatibility (HY) -21200 + (ID) 4300
Total energy: -340331.0 ( -96.55 by residue)
QMean score : 0.441
|
|
|