Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEHDFETISSETLHTGAIFALRRDQVRMPGGGIVTREVVEHFGAVAIVAMDDNGNIPMVYQYRHTYGRRLWELPAGLLDVAGEPPHLTAARELREEVGLQASTWQVLVDLDTAPGFSDESVRVYLATGLREVGRPEAHHEEADMTMGWYPIAEAARRVLRGEIVNSIAIAGVLAVHAVTTGFAQPRPLDTEWIDRPTAFAARRAER
5C7Q Chain:A ((1-178))
MKHLEEKTLSTRQIFKGRYLKIEQDQVQAPDGRTYTREYILHPGAAMMIPLLPNGNVVMIHQYRHAVKKVFLEFPAGKRD-HNEETLLTAKRELLEETGYEAKDWKFLTTIHPVIGYSNEHIDLYLARDLTHLE-QR-LDQGEFIEVVEVKPADLMQLVLEGKVSDVKTQIGAFWLDKFLR--------------------------
General information:
TITO was launched using:
RESULT:
Template:
5C7Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89538 for 1247 contacts (-71.8/contact) +
2D Compatibility (PS) -19204 + (NN) -4599 + (LL) 2144
1D Compatibility (HY) -11200 + (ID) 2650
Total energy: -125047.0 ( -100.28 by residue)
QMean score : 0.695
(partial model without unconserved sides chains):
PDB file :
Tito_5C7Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5C7Q-query.scw
PDB file :
Tito_Scwrl_5C7Q.pdb
: