Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTATLTKTLGSLDDFRGTLCVPGDPDYPRVRA------IWNGQVAREPALIATCHDACDVRTVLRRAVDAGMVTAVRGGGHNVAGTALC----DGGVVIDLSAMRAVSLDPATGRVRVQGGATLADLDHATVPF--ARVAPAGIVTTTGVGGLTLGGGVGWTTRRFGLSCDNLVAVRLVTAAGDYLSVDDERDPELMWGLRGGG-GNFGIVTEFEFATHPFGPVAVAGFVVYRL-DDGPAVLRGYRQFAAAAPEEVTTIVVLRHAPPAPWIPVDQRGKPVVMIGAVHTGSIQTGIEALR-PVKSLARPVADTVWPTPFLAHQAVLD----A----SN-PA----GHRYYWKSDHLA-ELNDEAIDLLVEQTAQLSSPDSLIGIFQLGGAAAR-GGERSCFPSRHA-RFMVNYATHWTEAREDDLHRQWTRDAIEALAPYG---LGTAYVNFTADDAPM---------------HVETLYSTTEFSRLVTLKNRLDPDNVFRNNHNIRPSA |
| 4PVK Chain:A ((25-496)) | -------------------YAKSSPAYPSVLGQTIRNSRWSSPDNVKPLYIITPTQVSHIQSAVVCGRRHTVRIRVRSGGHDYEGLSYRSLQPETFAVVDLNKMRAVWVDGKARTAWVDSGAQLGELYYAIYKASPTLAFPAGVCPTVGVGGHFAGGGFGMLLRKYGIAAENVIDVKLVDANGKLHDKKS-MGDDHFWAVRGGGGESFGIVVAWQVKLLPVPPTVTIFKISKTVSEGAVDIINKWQVVAPQLPADLMIRIIAQ--G------------PKATFEAMYLGTCKTLTPLMSSKFPELGMN-PSHCNEMSWIQSIPFVHLGHRDALEDDLLNRQNSFKPFAEYKSDYVYQPFPKTVWEQILNTWLVKPG-AGIMIFDPYGATISATPESATPFPHRKGVLFNIQYVNYWFAPGAAAAPLSWSKDIYNYMEPYVSKNPRQAYANYRDIDLGRNEVVNDVSTYASGKVWGQKYFK-GNFERLAITKGKVDPTDYFRNEQSIPPL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PVK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -251026 for 3737 contacts (-67.2/contact) +
2D Compatibility (PS) -46307 + (NN) -19341 + (LL) 1940
1D Compatibility (HY) -19200 + (ID) 4750
Total energy: -338684.0 ( -90.63 by residue)
QMean score : 0.542
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