Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MATSKVERLVNLVIALLST--RGYITAEKIRSSVAGYSDSPSVEAFSRMFERDKNELRDLGIPLEVGRVSALEPTEGYRINRDAYALSPVELTPDEAAAVAVATQLWESPELITATQGALLKLRAAGVDVDPLDTGAPVAIASAAAVSGLRGSEDVLGILLSAIDSGQVVQFSHRSSRAEPYTVRTVEPWGVVTEKGRWYLVGHDRDRDATRVFRLSRIGAQVTPIGPAGATTVPAGVDLRSIVAQKVTEVPTGEQATVWVAEGRATALRRAGRSAGPRQLGGRDGEVIELEIRSSDRLAREITGYGADAIVLQPGSLRDDVLARLRAQAGALA |
4HF1 Chain:A ((4-83)) | --TSKGRYAVTAMLDVALNSEAGPVPLADISERQG---------ISLSYLEQLFSRLRKNGL-VSSVR----GPGGGYLLG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HF1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21384 for 398 contacts (-53.7/contact) +
2D Compatibility (PS) -6619 + (NN) -1697 + (LL) 17776
1D Compatibility (HY) -1600 + (ID) 700
Total energy: -14224.0 ( -35.74 by residue)
QMean score : 0.760
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