Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLIAARRYSATMHGSASEACGSVDHLVDRHPTVSPVRLIAQLRPPPTFAEVSFATYRPDPVEPTQAAAVVACQDFCRQAVERRAGRKKWFGKRDVLPGVGLYLDGGFGVGKTHLLASAYYQLPGTGPDAPTCPKAFATFGELTQLAGVFGFADCIDLLANYTALCIDEFELDDPGNTTLISRLLSALVERGVSVAATSNTLPEQLGEGRFAAQDFLREINTLASIFTTVRIEGPDYRHRDLPPAPAPLSDEEVAARAARVEGATLDDFDALCAHLATMHPSRYLTLIEGVTAVFLTGVHGIDDQNVALRLVALVDRLYDAGIPVVASGAKLDTIFSEEMLAGGYRKKYLRATSRLLALTAGVIQAREP |
| 3N70 Chain:A ((23-120)) | -------------------------------------------------------------------------------------------------TDIAVWLYGAPGTGRMTGARYLHQFGRNA-----QGEFVYRELTPDNAPQ----LNDFIA-LAQGGTLVLSHPEHLTREQQYHLVQLQSQE-HRPFRLIGIGDTSLVEL------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3N70.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42827 for 657 contacts (-65.2/contact) +
2D Compatibility (PS) -10238 + (NN) -1919 + (LL) 18868
1D Compatibility (HY) -400 + (ID) 750
Total energy: -37266.0 ( -56.72 by residue)
QMean score : 0.268
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