Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MTVGTLVASVLPATVFEDLAYAELYSDPPGLTP------------LPEEAPLIARSVAKRRNEFITVRHCARIALDQLGVPPAPILKGDKGEPCWPDGMVGSLTHCAGYRGAVVGRRDAVRSVGIDAEPHDVLPNGVLDAISLPAERADMPRTMPAALHWDRILFCAKEATYKAWFPLTKRWLGFED----AHITFETDSTGWTGRFVSRILIDGSTLSGPPLTTLRGRWSVERGLVLTAIVL--------------- |
| 4IAP Chain:A ((5-260)) | GRYLQGYLLKKRRVDNIFEMLRIDEGLRLKIYKNTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDS--LDAVRRAALINMVFQMGETGVAGF---TNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAK--RVITTFRTGTWDAYVDQGFKKRFFTLDFRYGTLSYYLNDHNQTCR--GEIVISLSSVSANKKDKIIIIDSGMEVWVLKATTKENWQSWVDALQTCFD |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IAP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86421 for 1500 contacts (-57.6/contact) +
2D Compatibility (PS) -22270 + (NN) 2940 + (LL) 396
1D Compatibility (HY) -7200 + (ID) 1500
Total energy: -114055.0 ( -76.04 by residue)
QMean score : 0.221
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