Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAGRSERLVITGAGGQLGSHLTAQAAREG------RDMLALTSSQWDITDPAAAERIIRHG--DVVINCAAYTDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPYEPTDETAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLAAGHGRVDVVDDQTGSPTYVADLAEALLALADAGVRGRVLHAANEGVVSRFGQARAVFEECGADPQRVRPVSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATALAAPANSTSIDRRLPSTRD |
2GGS Chain:A ((1-273)) | -----MRTLITGASGQLGIELSRLLSERHEVIKVYNSSEIQGGYKLDLTDFPRLEDFIIKKRPDVIINAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDSYIVHISTDYVFDGE-----KGNYKEEDIPNPINYYGLSKLLGETFALQ--DDSLIIRTSGIFRN---KGFPIYVYKTLKEGKTVFAFK-GYYSPISARKLASAILELLELRKTG-IIHVAGER-ISRFELALKIKEKFN-LPGEVKEVDE-VRGWIAKRPYDSSLDSSRARKILSTDFYTLDLDGMVV------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GGS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -82434 for 2290 contacts (-36.0/contact) +
2D Compatibility (PS) -28807 + (NN) -9822 + (LL) 1572
1D Compatibility (HY) -12000 + (ID) 4100
Total energy: -135591.0 ( -59.21 by residue)
QMean score : 0.429
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