Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSISASEARQRLFPLIEQVNTDHQPVRITSRAGDAVLMSADDYDAWQETVYLLRSPENARRLMEAVA-RDKAGHSAFTKSVDE----LREMAGGEE
4I16 Chain:A ((3-92))
-----AALWDNVECNRHMLSRYINPAKLTPYLRQCKVIDEQDEDEVLNAPMLPSKINRAGRLLDILHTKGQRGYVVFLESLEFYYPELYKLVTGK-
General information:
TITO was launched using:
RESULT:
Template:
4I16.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20307 for 571 contacts (-35.6/contact) +
2D Compatibility (PS) -8929 + (NN) -1168 + (LL) 604
1D Compatibility (HY) -2800 + (ID) 650
Total energy: -33250.0 ( -58.23 by residue)
QMean score : 0.261
(partial model without unconserved sides chains):
PDB file :
Tito_4I16.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4I16-query.scw
PDB file :
Tito_Scwrl_4I16.pdb
: