Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSICDPALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTRRLRRAKFEAQATFEDFDFTANPKLPGAMLRDLAALRW-LDAGESVILHGPVGVGKTHVAQALVHAVARR-------GGDV------------RFAK----------------------TSRMLSDLAG----------------------GHADRSWGQRI----REYTKPLVLILDDFAMREHTAMHADDLYELISDRA--ITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSYRPRKRPGRTTS |
| 4MYC Chain:A ((383-633)) | --------------FQLSVPLNFLGSVYRDL-KQSLIDMETLFKLRKNEVKIKNAERPL--MLPENVPYDITFENVTFGYHPD--RKILKN---ASFTIPAGWKTAIVGSSGSGKSTILKLVFRFYDPESGRILINGRDIKEYDIDALRKVIGVVPQDTPLFNDTIWENVKFGRIDATDEEVITVVEKAQLAPLIKKLPQGFDTIVGERGLMISGGEKQRLAIARVLLKNARIMFFDEA-TSALDTHTEQALLRTIRDNFTSGSRT-SVYIAHRL---------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MYC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35927 for 1026 contacts (-35.0/contact) +
2D Compatibility (PS) -18769 + (NN) -1765 + (LL) 3384
1D Compatibility (HY) -9600 + (ID) 1550
Total energy: -64227.0 ( -62.60 by residue)
QMean score : 0.206
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