Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPSKAKVAIVGSGNISTDLLYKLLRSEWLEPRWMVGIDPESDGLARAAK-LGLETTHEGVDWLLAQPDKPDLVFEATSAYVHRDAAPKYAEAGIRAIDLTPAAVGPAVIPPANLREHLDAPNVNMITCGGQATIPIVYAVSRIVEV-PYAEIVA-SVASVSA-GPGTRANIDEFTKTTARGVQTIGGAARGKAIIILN----------------PADPPMIMR-DTIFCAIPTDADREAIAASIHDVVKEVQTYVPG--------YRLLNEPQFD-EPSINSGGQALVTTFVEVEGAGDYLPPYAGNLDIMTAAATKVGEEIAKETLVVGGAR |
| 1ZH8 Chain:A ((16-340)) | -LRKIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFDSYEELLESGL-VDAVDLTLPVELNLPFIEKALRKGVHVICEKPIS--TDVETGKKVVELSEKSEKTVYIAENFRHVPAFWKAKELVESGAIGDPVFMNWQIWVGMDENNKYVHTDWRKKPKHV----GGFLSDGGVHHAAAMRLILGEIEWISAVAKDLSPLLGGMDFLSSIFEFENGTVGNYTISYSLKGNERFEITGTKGKISISWDKIVLNEEEMKVPQENSYQKEFEDFYQVVAEGKPNDLGSPVQALKDLAFIEACVRSAGNKVFVSSLL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZH8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92652 for 2384 contacts (-38.9/contact) +
2D Compatibility (PS) -31838 + (NN) -12645 + (LL) 860
1D Compatibility (HY) 400 + (ID) 1850
Total energy: -137725.0 ( -57.77 by residue)
QMean score : 0.294
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