Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMIEGLEKMLAKG----VDNALLRFGLGKGYLDAGDAERAAEHLQRCVEQDPKYSAGWKLLGKARQAAGDLAGARQAWEQGLATAATHGDKQAEKEMTVFLRKLDRART
1XNF Chain:A ((23-111))
VILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQ
General information:
TITO was launched using:
RESULT:
Template:
1XNF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10625 for 571 contacts (-18.6/contact) +
2D Compatibility (PS) -9686 + (NN) -8881 + (LL) 0
1D Compatibility (HY) -5200 + (ID) 900
Total energy: -35292.0 ( -61.81 by residue)
QMean score : 0.639
(partial model without unconserved sides chains):
PDB file :
Tito_1XNF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XNF-query.scw
PDB file :
Tito_Scwrl_1XNF.pdb
: