Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSFAQNLLRLRQQNALTQRQMAERLGITVSQLRHFETKGGHPSLVVLQTIAGRFAVPLDWLVCERSERQALPEDLRLQFEAIGRLRLDERRAIRALLDDLIRQYMAKRNAAAKPLPAACAEATETSP
1R69 Chain:A ((2-63))
--ISSRVKSKRIQLGLNQAELAQKVGTTQQSIEQLENGKT-KRPRFLPELASALGVSVDWLLNGT--------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1R69.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44449 for 427 contacts (-104.1/contact) +
2D Compatibility (PS) -6791 + (NN) -3690 + (LL) 5580
1D Compatibility (HY) -3600 + (ID) 700
Total energy: -53650.0 ( -125.64 by residue)
QMean score : 0.602
(partial model without unconserved sides chains):
PDB file :
Tito_1R69.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1R69-query.scw
PDB file :
Tito_Scwrl_1R69.pdb
: