Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDRLTATRVFVEVIDSGSQTAAAERLDMSRAMVSRYLAELEEWVGARLLHRSTRRLSLTDAGAELLPQCREMLAVADAMQATGQTRRDSPRGTLRITSSLSFAQAWLTRAAAAFVERYPGTAIDLQVNSQVVNLVEERIDLALRIANQLDPNLIARRLGECR-SVICAAPDYLRRHGTPRRPEDLALHNCLTYSYFGRSLWQF-ERDGEPTSVPVGGS-LSANESTV-LLEAAAA-GAGISQQPLYS-AAPLIRSGRLVALLPEWSPQVLGIHAVYASRRQMPPAL-RALLDFLVERMAADPHWDEAGPLALA |
| 3KOS Chain:A ((11-210)) | ------------------------------------------------------------------------------------------QEKLKIGVVGTFAIGCLFPLLSDFKRSYPHIDLHISTHNNRVDPAAEGLDYTIRYGGGAWHDTDAQYLCSALMSPLCS-PTLASQ---IQTPADILKFPLLR-SYRRDEWALWMQTVGEAPPSPTHNVMVFDS-SVTMLEAAQAGMGVAIA---PVRMFTHLLSSERIVQPFLTQIDL--GSYWITRLQSRPETPAMREFSRWLTGVLHKT------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KOS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -111484 for 1459 contacts (-76.4/contact) +
2D Compatibility (PS) -20006 + (NN) -5176 + (LL) 9128
1D Compatibility (HY) -4000 + (ID) 1900
Total energy: -133438.0 ( -91.46 by residue)
QMean score : 0.434
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