Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRHGLLRSLFAAAALLGAAGVFAASAEPLRLEVYNPGEKAIFAVSSELLVG----QREAMLIDAQFSRADAEQLVKRIQASGKTLSTIYISHGDPDFYFGLDVLKAAFPEAKILATAQTVAHIQATKDAKLAYWGPILKDNAPTSLVVPEPLKGDQLKLEGHALKVVDLKGPSPDRTVLWIP------SLKTVVGGVLVESGSHVWTADTQTQASRQAWVAMLDR-IEALQPR-RVVPGHFTGEEPKGLDGVRFTRDYLKALEAELPKARDSAALVEAMKRRYPNLPGEEGLELSAKVLKGEMQWP |
| 2GCU Chain:A ((12-186)) | -----------------------------------------ESSTFTYLLADVSHPDKPALLIDPVDKT--VDRDLKLIDELGLKLIYAMNTHVHADHVTGTGLLKTKLPGVKSVISKASGSKA------------------------DLFLEPGDKVSIGDIYLEVRATPGHTAGCVTYVTGEGADQPQPRMAFTGDAVLIRGCGRTDF--QEGSSDQLYESVHSQIFTLPKDTLIYPAHDYKGFEVSTVGEEMQHNPRLTKDKETFKTIMSNLNLSYPKMIDVAVPANMVCSWGLQDVPSQA--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GCU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87848 for 1352 contacts (-65.0/contact) +
2D Compatibility (PS) -17849 + (NN) -4638 + (LL) 4968
1D Compatibility (HY) -400 + (ID) 1500
Total energy: -107267.0 ( -79.34 by residue)
QMean score : 0.484
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