Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------------------------------------------------------------------------------------------------MQLTRLVQVDCPLGPDVLLL-QRMEGREELGRLFAYELHLVSENPNLPLEQLLGKPMSLSLEL--PGGSRRFFHGIVARCSQVAGHGQFAGYQATLRPWPWLLTRTSDCRIFQNQSVPEIIKQVFRNLGFSDFEDALTRPYREWEYCVQYRETSFDFISRLMEQEGIYYWFRHE---QKRHILVLSDAYGAHRSPGGYASV---PYYPPTLGHRERDHFFDWQ---MAREVQPGSLT--LNDYDFQRPGARLEVRSNIARP------HAAADYPLYDYPGEYV---------QSQDGEQYARNRIEAIQAQHERVRLRGVVRGIGAGHLFRLSGY---PRDDQNREYLVVGAEYRVV-QELYETGSGGAGSQFESELDCIDASQSFRL--LPQTPVPVVRGPQTAVVVG--PKGEEIWTDQYGRVKVHFHWDRHDQSNENSSCWIRVSQAWAGKN-----------WGSMQIPRIGQEVIVSFLEGDPDRPIIT-------GRVYNAEQTVPYELPANATQS---------------GMKSRSSKGGTPANFNEIRMEDKKGAEQLYIHAERNQDNLVENDASLSVGHDRNKSIGHDELARIGNNRTRAVKLNDTLLVGGAKSDSVTGTYLIEA-----------GAQIRLVCGKSVVEFNADGTINISGSAFNLYASGNGNIDT--GGRLDLNSGGASEVDAKGKGVQGTIDGQVQAMFPPPAKG------------ |
| 3B34 Chain:A ((26-891)) | PQAKYRHDYRAPDYQITDIDLTFDLDAQKTVVTAVSQAVRHGASDAPLRLNGEDLKLVSVHINDEPWTAWKEEEGALVISNLPERFTLKIINEISPAANTALEGLYQSGDALCTQCEAEGFRHITYYLDRPDVLARFTTKIIADKIKYPFLLSNGNRVAQGELENGRHWVQWQDPFPKPCYLFALVAGDFDVLRDTFTTRSGREVALELYVDRGNLDRAPWAMTSLKNSMKWDEERFGLEYDLDIYMIVAVDFFNMGAMENKGLNIFNSKYVLARTD-----TATDKDYLDIERVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDLGSRAVNRINNVRTMRGLQFAEDASPMAHPIRPDMVIEMNNFYTLTVYEKGAEVIRMIHTLLGEENFQKGMQLYFERHDGSAATCDDFVQAMEDASNVDLSHFRRWYSQSGTPIVTVKDDYNPETEQYTLTISQRTPATPDQAEKQPLHIPFAIELYDNEGKVIPLQKGGHPVNSVLNVTQAEQTFVFDNVYFQPVPALLCEFSAPVKLEYKWSDQQLTFLMRHARNDFSRWDAAQSLLATYIKLNVARHQQGQPLSLPVHVADAFRAVLLDEKIDPALAAEILTLPSVNEMAELFDIIDPIAIAEVREALTRTLATELADELLAIYNANYQSEYRVEHEDIAKRTLRNACLRFLAFGETHLADVLVSKQFHEANNMTDALAALSAAVAAQLPCRDALMQEYDDKWHQNGLVMDKWFILQATSPAANVLETVRGLLQHRSFTMSNPNRIRSLIGAFAGS-NPAAFHAEDGSGYLFLVEMLTDLNSRNPQVASRLIEPLIRLKRYDAKRQEKMRAALEQLKGLENLSGDLYEKITKALA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B34.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 44325 for 5078 contacts (8.7/contact) +
2D Compatibility (PS) -65056 + (NN) 5391 + (LL) 732
1D Compatibility (HY) -9200 + (ID) 4000
Total energy: -27808.0 ( -5.48 by residue)
QMean score : 0.081
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