Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVEIHLPGATTA-LPARLDGVVIGVLLDVPDAAAPV-VAYPG--CPSEHG-LAAATTTQLSRADIGAQVALMFVAGDPRQPLLIGRIQ-RLPQEALAQLDGERLEFSAEREIVLRCGKASITLTRAGKVIIRG-AYLSSRSTGVNRIKGGSVQIN---
3F9U Chain:A ((28-172))
-EVHAKFDDYDLGMEYARQHN-------------KPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINNDYVLITLYVDNKTPLTEPVKIMENGTERTLRTVGDKWSYLQRVKFGANAQPFYVLIDNEGNPLNKSYAYDEDISKYINFLQTGLENYRKEK
General information:
TITO was launched using:
RESULT:
Template:
3F9U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22133 for 938 contacts (-23.6/contact) +
2D Compatibility (PS) -13943 + (NN) 3678 + (LL) 1356
1D Compatibility (HY) -1200 + (ID) 1100
Total energy: -33342.0 ( -35.55 by residue)
QMean score : -0.014
(partial model without unconserved sides chains):
PDB file :
Tito_3F9U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F9U-query.scw
PDB file :
Tito_Scwrl_3F9U.pdb
: