Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRWEELSEQPCSLARVLAILGDRWTLLVLRDCFL-GVRRFDDFERSLGVTRHVLADRLKRLVEAEILAKVPYQERPLREEYRLTEKGMELYPAILSLVNWGDRHLAGVEGPPLEHVHKHCGQHMHGVLVCSECGEPLHARDVTVREGLFWKGRLLRRG
1UB9 Chain:A ((1-100))
-------MEELKEIMKSHILGNPVRLGIMIFLLPRRKAPFSQIQKVLDLTPGNLDSHIRVLERNGLVKTYKVIADRPRTVVEITDFGMEEAKRFLSSLKAVIDGLDL---------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1UB9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65943 for 631 contacts (-104.5/contact) +
2D Compatibility (PS) -10240 + (NN) -57 + (LL) 3692
1D Compatibility (HY) -5600 + (ID) 850
Total energy: -78998.0 ( -125.19 by residue)
QMean score : 0.397
(partial model without unconserved sides chains):
PDB file :
Tito_1UB9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UB9-query.scw
PDB file :
Tito_Scwrl_1UB9.pdb
: