Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVASKEPIMSQSERRFSFEFFPAKTEAGHEKLLATARNLAGYKPDFFSCTYGAGGSTRDRTLSTVLQLDGEVKVPTAPHLSCVGDSKAELRELLGRYREAGIRRIVALRGDLPSGMGMASGELRYANELVDFIRTETGDHFHIEVAAYPEVHPQARSFEDDLANFVRKVKAGASSAITQYFFNADAYFYFVERVAKLGVDIPVVPGIMPITNYSKLARFSDACGAELPRWIRKQLEAYGDDSRSIQAFGEQVISEMCERLLEGGAPGLHFYTLNQADPSLAIWKNLQLPR-
1B5T Chain:A ((1-275))
-----------GQINVSFEFFPPRTSEMEQTLWNSIDRLSSLKPKFVSVTYGANSGERDRTHSIIKGIKDRTGLEAAPHLTCIDATPDELRTIARDYWNNGIRHIVALRGDLPPG---SGKPEMYASDLVTLLKEV--ADFDISVAAYPEVHPEAKSAQADLLNLKRKVDAGANRAITQFFFDVESYLRFRDRCVSAGIDVEIIPGILPVSNFKQAKKFADMTNVRIPAWMAQMFDGLDDDAETRKLVGANIAMDMVKILSREGVKDFHFYTLNRAEMSYAICHTLGVRPA
General information:
TITO was launched using:
RESULT:
Template:
1B5T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -163595 for 2206 contacts (-74.2/contact) +
2D Compatibility (PS) -29588 + (NN) -12940 + (LL) 1172
1D Compatibility (HY) -24000 + (ID) 5350
Total energy: -234301.0 ( -106.21 by residue)
QMean score : 0.630
(partial model without unconserved sides chains):
PDB file :
Tito_1B5T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B5T-query.scw
PDB file :
Tito_Scwrl_1B5T.pdb
: