Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTVLKMTDLDLKGKRVLIREDLNVPVKDGQVQSDARIKAALPTLKLALEKGAA-VMVCSHLGRPTEGEFSAENSLKPVAEYLSKALGREVPLLADYLDGVEVKA-------GDLVLFENVRFN--------------KGEKKNADELAQKYAALCDVFVMDAFGTAHRAEGSTHGVARFAKVAAAGPLLAAELDALGKALGNPARPMAAIVAGSKVSTKLDVLNSLAGICDQLIVGGGIANTFLAA-AGHKVGKSLYE---ADLVE--TAKAIAAKVKVPLPVDVVVAKEFAESAVATVKAIAEVADDDMI------LDIGPQTAAQFAELLKTSKTILWNGPVGVFEFDQFGEGTRTLANAIADSAAFS---IAGGGDTLAAIDKYGIAERISYISTGGGAFLEFVEGKVLPAVEILEQRAKG |
| 1QPG Chain:A ((6-414)) | ---LSVQDLDLKDKRVFIRVDFNVPLDGKKITSNQRIVAALPTIKYVLEHHPRYVVLASHLGQPN-GERNEKYSLAPVAKELQSLLGKDVTFLNDCV-GPEVEAAVKASAPGSVILLENLRYHIEEEGSRKVDGQKVKASKEDVQKFRHELSSLADVYINDAFGTAHRAHSSMVGFDLPQR--AAGFLLEKELKYFGKALENPTRPFLAILGGAKVADKIQLIDNLLDKVDSIIIGGGMAFTFKKVLENTEIGDSIFDKAGAEIVPKLMEKAKAKGVEVVLPVDFIIADAF--SADANTKT---VTDKEGIPAGWQGLDNGPESRKLFAATVAKAKTIVWNGPPGVFEFEKFAAGTKALLDEVVKSSAAGNTVIIGGGDTATVAKKYGVTDKISHVSTGGGASLELLEGKELPGVAFLSEKK-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QPG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -247145 for 3150 contacts (-78.5/contact) +
2D Compatibility (PS) -40531 + (NN) -14498 + (LL) 1724
1D Compatibility (HY) -32000 + (ID) 8600
Total energy: -341050.0 ( -108.27 by residue)
QMean score : 0.549
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