Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNFQIVINN---IQHIGYAELDVDLNASGIICIVGKNGVGKTTLIKAILNLKSAD---TFSRTASPGIFKANSSMRCTYGENSYEFSFDSDINDLNSRSPIPEELKSVIDVELPMPFGQRFNNYQNIMSADMDIRTALILGEYEVPVELISFLSDIYKTNKFNGLVEVSAKGGSYYCIPLDDDRYV--REDHLSSGEFFLISLYRKIKGRSKFIVIDEIDISLDAAAQAHLIGWLRRFCTTEQVKVVFTTHSLALMRTLKDGELFYMEESEGKVSVIPSSYNYIKSVLFGFKGWDRYILTEDAMLKSLLEYVLANYCSGLFFSYQIIHVGGGSNVVDLMRQNSTEGFFSTPENVISVLDGDQAEYRYARRPNVYCIPFLSVEKAIFAEYKAGRFLPELAPDPRFDTPKNFCSAIGRDRHATEADIIKYLCDSYPTEVRRFAQTLSDFLS |
| 3WMG Chain:A ((355-568)) | -NVHFRYPTRMNVEVLRGISLTIPN--GKTVAIVGGSGAGKSTIIQLLMRFYDIEPQGGG---------------LLLFDGTPAWNYD--FHALRSQIGLVS---QEPVLFSGTIRDNILYGKRDA------------------TDEEVIQALR------------EANAYSFV-MALPDGLDTEVGERGLALSGGQKQRIAIARAILKHPTLLCLDESTSALDAESEALVQEALDRMMASDGVTSVVIAHRLSTVARAD--LILVMQDGVVVEQGNHSELMALGPSGFYYQLVEKQLAS----------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WMG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97436 for 1569 contacts (-62.1/contact) +
2D Compatibility (PS) -22276 + (NN) -9407 + (LL) 12140
1D Compatibility (HY) -6400 + (ID) 1900
Total energy: -125279.0 ( -79.85 by residue)
QMean score : 0.307
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