Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRIDTPPGFAVYPSASPKAANLPAVDQVLAFEQALGGEPPAAGRRLAGLE-NGALGERLLQRFAQPLQGLEADRLELKAMLRAELPLGRQQQ----TFLLQLLGAVEHAPGGEYLAQLARRELQVLIP----------LNGMLDNLVRNSHKLDLES
1EYV Chain:A ((9-139))
----------------GRHQARKRAVALLFEAEVRGISAAEVVDTRAALAEAKPDI-ARLHPYTAAVARGVSEHAAHIDDLITAHLRGWTLDRLPAVDRAILRVSVWELLHAADVPEPVVVDEAVQLAKELSTDDSPGFVNGVLGQVM----------
General information:
TITO was launched using:
RESULT:
Template:
1EYV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26939 for 847 contacts (-31.8/contact) +
2D Compatibility (PS) -13113 + (NN) -10930 + (LL) 824
1D Compatibility (HY) -1600 + (ID) 950
Total energy: -52708.0 ( -62.23 by residue)
QMean score : 0.350
(partial model without unconserved sides chains):
PDB file :
Tito_1EYV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EYV-query.scw
PDB file :
Tito_Scwrl_1EYV.pdb
: