Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSQMMQM-YQQVGPAQFSAMIGQFAPYFASIAPQFVELRPGYAEV-TFPKRREVLNHIGTVHAIA-LCNAAELAAGTMTDASIPAGHRWIPRGMTVEY-LAKATGDVRAVADGSQIDWQATGNLVVPVVAYVD-DKPVFRAE-ITMYVSQA
2QWZ Chain:A ((14-157))
-NLYFQGMELVFDKDGLSAYLEEV--FPQIQGEFSIDALAKGEITMRLNVQERHLRPGGTVSGPSMF-ALADVSVYALVLAHLGREALAVTTNASLDFMRKPESGR-DLLGQARLLKLGRTLAVGDILLFSEGMEAPVARSTMTYSIPP--
General information:
TITO was launched using:
RESULT:
Template:
2QWZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27220 for 992 contacts (-27.4/contact) +
2D Compatibility (PS) -14358 + (NN) -635 + (LL) 724
1D Compatibility (HY) -2000 + (ID) 700
Total energy: -44189.0 ( -44.55 by residue)
QMean score : 0.130
(partial model without unconserved sides chains):
PDB file :
Tito_2QWZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QWZ-query.scw
PDB file :
Tito_Scwrl_2QWZ.pdb
: