Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGIPEITAYPLPTAQQLPANLARWSLEPRRAVLLVHDMQRYFLRPLPE--------SLRAGLVANAARLRRWCVEQGVQIAYTAQPGSMTEEQ-----RGLLK-DFWGPGMRASPADREVVEELAPGPDDWLLT-KWRYSAFFHSDLLQRMRAAGRDQLVLCGVYAHVGVLISTVDAYSNDIQPFLVADAIADFSEAHHRMALEYAASRCAMVVTTDEVLE
3KL2 Chain:A ((17-215))
----------------------EKLELDPARTAIVLIEYQNEFTSDGGVLHGAVADVMQHTGMLANTVAVVDAARQAGVPIMHAPITFAEGYGELTRHPYGILKGVVDGKAFVKGTWGAAIVDELAPVNGDIVIEGKRGLDTFASTNLDFILRSKGVDTIVLGGFLTNCCVESTMRTGYERGFRVITLTDCVAATSQEEHNNAISYDFPMFSVPMTSADVIA
General information:
TITO was launched using:
RESULT:
Template:
3KL2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -122151 for 1476 contacts (-82.8/contact) +
2D Compatibility (PS) -19558 + (NN) -10576 + (LL) 1276
1D Compatibility (HY) -9200 + (ID) 2000
Total energy: -162209.0 ( -109.90 by residue)
QMean score : 0.614
(partial model without unconserved sides chains):
PDB file :
Tito_3KL2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KL2-query.scw
PDB file :
Tito_Scwrl_3KL2.pdb
: