Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLSNAQRALIKATVPLLETGGEALITHFYRTMLGEYPEVRPLFNQAHQASGDQPRALANGVLMYARHIDQLQELGPLVAKVVNKHVSLQVLPEHYPIVGTCLLRAIREVLGEQIATDEVLEAWGAAYQQLADLLIEAEESVYAASAQADGGWRGVRRFRVARKQAESEEITSFYLEPVDGQPLLAFQPGQYIGLRLDID--GEEVRRNYSLSAASNGREYRISVKREAG-----GRVSNYLHDRVAEGDELDLFPPAGDFVLRDSDKPLVLITAGVGITPALAMLQEALPQARPIRFIHCARHGGVHAFRDWIEDVSAQHEQVEHFFCYSEPRAGDSADAEGLLSREKLADWLPQERDLDAYFLGPRPFMAQVKRHLADLGVPSQQCHYEFFGPAAALDA
1CQX Chain:A ((151-261))-------------------------------------------------------------------------------------------------------------------------------------------------------WKGWRTFVIREKRPESDVITSFILEPADGGPVVNFEPGQYTSVAIDVPALGLQQIRQYSLSDMPNGRTYRISVKREGGGPQPPGYVSNLLHDHVNVGDQVKLAAPYGSFHI------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1CQX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44813 for 683 contacts (-65.6/contact) +
2D Compatibility (PS) -10898 + (NN) -2716 + (LL) 21828
1D Compatibility (HY) -9200 + (ID) 2750
Total energy: -48549.0 ( -71.08 by residue)
QMean score : 0.603

(partial model without unconserved sides chains):
PDB file : Tito_1CQX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1CQX-query.scw
PDB file : Tito_Scwrl_1CQX.pdb: