Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRALLLSGCLALVLLTQQAAAQTLLVVGDSISAALGLDTSQGWVALLQKRLADEGYDYRVVNASISGDTSAGGLARLPALLAEEKPALVVIELGGNDGLRGM---APAQLQQNLASMAQKARAEGAKVLLLGIQLPPNY-------GPRYIEAFSRVYGAVAAQEKTALVPFFLEGVG---GVQGMMQADGIHPALAAQPRLLENVWPTLKPLL
3P94 Chain:A ((20-203))
------------------KVPSNVVFMGNSITDGWWPAD-------ST-FF----IRNNFVDRGISGQTTSEMLVRFRQDVINLKPKAVVILAGINDIAHNNGVIALENVFGNLVSMAELAKANHIKVIFCSVLPAYDFPWRPGMQPADKVIQLNKWIKEYADKNGLTYVDYHSAMKDERNGLPANLSKDGVHPTLEGYKIMEKIVLEAIHKTV
General information:
TITO was launched using:
RESULT:
Template:
3P94.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101051 for 1436 contacts (-70.4/contact) +
2D Compatibility (PS) -18628 + (NN) -6645 + (LL) 2820
1D Compatibility (HY) -10800 + (ID) 1850
Total energy: -136154.0 ( -94.81 by residue)
QMean score : 0.507
(partial model without unconserved sides chains):
PDB file :
Tito_3P94.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P94-query.scw
PDB file :
Tito_Scwrl_3P94.pdb
: