Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMATQGVFTLPANTRFGVTAFANSSGTQTVNVLVNNETAATFSGQSTNNAVIGTQVLNSGSSGKVQVQVSVNGRPSDLVSAQVILTNELNFALVGSEDGTDNDYNDAVVVINWPLG
2JDY Chain:D ((2-115))-ATQGVFTLPANTRFGVTAFANSSNTQTVNVLVNNETAATFSGQSTNNAVIGTQVLNSGSSGKVQVQVSVNGRPSDLVSAQVILTNELNFALVGSEDGTDNDYNDAVVVINWPLG


General information:
TITO was launched using:
RESULT:

Template: 2JDY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -42022 for 835 contacts (-50.3/contact) +
2D Compatibility (PS) -13043 + (NN) -11728 + (LL) 208
1D Compatibility (HY) -14000 + (ID) 5650
Total energy: -86235.0 ( -103.28 by residue)
QMean score : 0.694

(partial model without unconserved sides chains):
PDB file : Tito_2JDY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2JDY-query.scw
PDB file : Tito_Scwrl_2JDY.pdb: