Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRKSWLTASLLALTVASPFAAADIQGHKAGDFIIRGGFATVDPDDSSSDIKLDGAKQRGTKATVDSDTQLGLTFTYMFADKWGVELVAATPFNHQVDVKGLGPGLDGKLADIKQLPPTLLLQYYPMGGTNSAFQPYGGLGVNYTTFFDEDLASNRKAQGFSSMKLQDSWGLAGELGFDYMLNEHALFNMAVWYMDIDTKASINGPSALGVNKTKVDVDVDPWVYMIGFGYKF |
1P4T Chain:A ((1-155)) | --------------------------EGASGFYVQADAAHAKASSSL-----------GSAKGFSPRISAGYRINDLRFAVDYTRYKNYKAPSTDF-----------------KLYSIGASAIYDFD-TQSPVKPYLGARLSLNRASVDL--------GGSDSFSQTSIGLGVLTGVSYAVTPNVDLDAGYRYNYI--------------GKVNTVKNVRSGELSAGVRVKF |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1P4T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -13694 for 1161 contacts (-11.8/contact) +
2D Compatibility (PS) -16110 + (NN) 1040 + (LL) 3848
1D Compatibility (HY) -400 + (ID) 1400
Total energy: -26716.0 ( -23.01 by residue)
QMean score : 0.137
|
|
|