Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGQDKLKVAVLFGGSSEERDVSIASGAQVIQALRSAGHQ--VLAVDTASGLLGAEEERRLLASKVKEVPPDSDSLAIIRSGKQSLLSAGE---------LAGVDVFFLALHGGTGEDGTLQALLDAGGFAYTGSGHLASAMAMDKDVAKRLFLAAGVETASWLM-----APASEEEVREQLGFPLVVKPNSQGSTVGLSIVHSQAELQPAIELAGRYGDEVMLERFVAGREVTVGVLDDQALP----VGEILLGGQEVFDYEHKYQAGAVRE-VFPADLPPAIAAEAQRLALKVHRALKLSGYSRTDFRLDEQGRLWCLEVNTLPGMTATSLLPQAAAAAGIGFAELCERICRLGIERCKGARKARS |
| 4ME6 Chain:A ((22-381)) | ----KIRVGLIFGGKSAEHEVSLQSARNILDALDPQRFEPVLIGIDKQGQWHVNDPDSFLLHAD------DPARIALHRSGRGVALLPGAQQQQLRPIQ-AQIDVVFPIVHGTLGEDGSLQGLLRMANLPFVGSGVLGSAVAMDKDMAKRVLRDARLAVAPFVCFDRHTAHADVDTLIAQLGLPLFVKPANQ---VGVSQVRTADAFAAALALALAYDHKVLVEAAVAGREIECAVLGN-AVPHASVCGEVV-------------------EIVIPADIDAQTQQRIQQIAVQAYQALGCAGMARVDVFLCADGRIVINEVNTLPGFTRISVYPKLWQASGLDYRGLITRLIELALERHTDDQLLRS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ME6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -162522 for 2525 contacts (-64.4/contact) +
2D Compatibility (PS) -34229 + (NN) -14461 + (LL) 1728
1D Compatibility (HY) -31600 + (ID) 5900
Total energy: -246984.0 ( -97.82 by residue)
QMean score : 0.464
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