Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQTLLKLLQDGRFHSGEELGAVLGISRSAVWKRLQHLEAEHGLQFHKVRGRGYRLASPLSLLDPRKIDSLWPVEIMPTVDSTNSEAMRRLAAGASTPFVIVAEQQTAGRGRRGRAWVSPYGENLYYSLAITVRGGARELEGLSLVVGL---AVLRALESLGVQDTGLKWPNDLLQGGKKIAGILLELSGDPADLCHVVIGIGINVNMK-TATDIGQPWTSLREALGELVDRSRLLSALNRQLADYLDRHSREGFAASREEWESCNLWQGAQVILSTALSSIEGRVLGVDSR-GALRLEVDGVEQGFSGGELSLRLRQ |
| 3EFR Chain:A ((8-231)) | ---------------------------------------------------------------------------LKEVDSTQ-ERLKEWNVSYGT--ALVADRQTKGRGGLGRKWLSQEG-GLYFSFLLN----PKEFENLLQLPLVLGLSVSEALEEITEIPFSLKWPNDVYFQEKKVSGVLRELSKD-----KLIVGIGINVNQREIPEEIKDRATTLYEITGKDWDRKEVLLKVLKRISENLKKFKEKSFKEFKGKIESKMLYLGEEVKL-LGEGKITGKLVGLSEKGGALILTEEGIKEILS-GEFSLR--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EFR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -88898 for 1736 contacts (-51.2/contact) +
2D Compatibility (PS) -23200 + (NN) -8685 + (LL) 5832
1D Compatibility (HY) -16800 + (ID) 3950
Total energy: -135701.0 ( -78.17 by residue)
QMean score : 0.441
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