Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDEQPLSRPGAHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYL---EPECRV--AEMLDHAGLERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQAR-VPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKS------SYVLCKWALDEQAREQAR-NGLPVVIGIPGMVLGELDIGPTTGRVIT--AIGNGEMTHYVAGQRNVIDAAEAGRGLLMALERGRIGERYLLTGHNLEMADLTRRIAELLGQPAPQPMSMAMARALATLGRLRYRVSGQLPLLDETAIEVMAGGQFLDGRKAREELGFFSTTALDDTLLRAIDWFRDNGYFNA |
| 2P4H Chain:X ((5-326)) | -----------KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIFHTASPIE-------IVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDDVARAHIYLLENSVPGGRYNCSPFIVPIEEMSQLLSAKYPEYQILTVDELKEIK----GARLPDLNT----------------------KKLVDAGFDFKYTIEDMFDDAIQCCKEKGYL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2P4H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -185847 for 2479 contacts (-75.0/contact) +
2D Compatibility (PS) -32028 + (NN) -13809 + (LL) 2836
1D Compatibility (HY) -12800 + (ID) 2400
Total energy: -244048.0 ( -98.45 by residue)
QMean score : 0.410
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