Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNTVKTVRELRAAVARA-RSEGKRIGFVPTMGNLHAGHAALVKKAGE-RADFVVVSIFVNPLQFGPSEDLDTYPRTLAADQERLLEAGCHLLFTPTVEEMYPDGMDGQTRIHVPGVSEGLCGASRPGHFEGVATVVSKLLNMVQPDLALFGEKDFQQLAVIRKLVRDLNLPVQIFGEPTVRAADGLALSSRNGYLDEQQRAAAPAIYRTLRQLGERIRAGAEDFPALLADARQALEQAGLRPDYLEIREPISLRPGVPGDRQLVILAAAYLGSTRLIDNLSVHLD
4DDH Chain:B ((21-287))-----------ADVSRALRLTGRRVMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNPMQF---------PRTPDDDLAQLRAEGVEIAFTPTTAAMYPDGL--RTTVQPGPLAAELEGGPRPTHFAGVLTVVLKLLQIVRPDRVFFGEKDYQQLVLIRQLVADFNLDVAVVGVPTVREADGLAMSSRNRYLDPAQRAAAVALSAALTAAAHAATAGAQAALDAARAVLDA--APGVAVDYLELRD-IGLGP-MPLNGSGRLLVAARLGTTRLLDNIAIEI-


General information:
TITO was launched using:
RESULT:

Template: 4DDH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -166442 for 2065 contacts (-80.6/contact) +
2D Compatibility (PS) -28559 + (NN) -17848 + (LL) 736
1D Compatibility (HY) -21600 + (ID) 6400
Total energy: -240113.0 ( -116.28 by residue)
QMean score : 0.503

(partial model without unconserved sides chains):
PDB file : Tito_4DDH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4DDH-query.scw
PDB file : Tito_Scwrl_4DDH.pdb: