Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQARYDKTYAGAHPIQPEDIAETIFWIMNQPAHLNINSLEIMPVSQSWAGFAIHRES
3ASU Chain:A ((1-240))
--MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG--DNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNH-GHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGG---------------------VALTPEDVSEAVWWVSTLPAHVNINTLEMMPVTQSY---------
General information:
TITO was launched using:
RESULT:
Template:
3ASU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -131508 for 1822 contacts (-72.2/contact) +
2D Compatibility (PS) -23399 + (NN) -8589 + (LL) 1980
1D Compatibility (HY) -22800 + (ID) 5700
Total energy: -190016.0 ( -104.29 by residue)
QMean score : 0.536
(partial model without unconserved sides chains):
PDB file :
Tito_3ASU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ASU-query.scw
PDB file :
Tito_Scwrl_3ASU.pdb
: