Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLHLKPGQLTLADLRQAYLAPVRLSLD--PSADAPIAASVACVENIIAEGRTAYGINTGFGLLASTRISPADLEKLQRSIVLSHAAGVGEALDDAMVRLVMLLKVNSLARGFSGIRRKVIDALIALINAEVYPHIPLKGSVGASGDLAPLAHMSLVLIGES---RARHRGEWLPAAEALAVAGLEPLTLAAKEGLALLNGTQVSTAYALRGLFEAEDLFAAATVCGGLSVEAMLGSRAPFDARIHAARGQRGQIDVAAAYRDLLTASSEVARSH----EKCDKVQDPYSLRCQPQVMGACLTQMRQAAEVLEIEANAVSDNPLVFAAEGDVISGGNFHAEPVAMAADNLALALAEIGSLSERRISLMMDMHMS-QLPPFLVA--NGGVNSGFMIAQVTAAALASDNKALAHP-ASVDSLPTSANQEDHVSMAPNAGKRLWAMAENVRGILAVEWLGACQGLDFREGL---------KSSPKLEQARRLLRDKVPYYQ--E---------DRFFAPDIEAASQLLASGCLNALLPARLLPSL |
| 2NYN Chain:A ((25-563)) | -NVIIGNQKLTINDVARVARNGTLVSLTNNTDILQGIQASCDYINNAVESG-----------------ISREQASELQTNLVWFLKTGAGNKLPLADVRAAMLLRANSHMRGASGIRLELIKRMEIFLNAGVTPYVYEFGSIG---DLVPLSYITGSLIGLDPSFKVDFNGKEMDAPTALRQLNLSPLTLLPKEGLAMMNGTSVMTGIAANCVYDTQILTAIAMGVHALDIQALNGTNQSFHPFIHNSKPHPGQLWAADQMISLLA-NSQLVRDELDGK-----IQDRYSLRCLPQYLGPIVDGISQIAKQIEIEINSVTDNPLIDVDNQASYHGGNFLGQYVGMGMDHLRYYIGLLAKHLDVQIALLASPEFSNGLPPSLLGNRERKVNMGLKGLQICGNSIMPLLTFYGNSIADRFPTHAEQFNQNINSQGYTSATLARRSVDIFQNYVAIALMFGVQAVDLRTYKKTGHYDARACLSPATERLYSAVRH-VVGQKPTSDRPYIWNDNEQGLDEHIARISADIAAGGVIVQAVQDIL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NYN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -256594 for 4242 contacts (-60.5/contact) +
2D Compatibility (PS) -52370 + (NN) -29752 + (LL) 1380
1D Compatibility (HY) -24400 + (ID) 6950
Total energy: -368686.0 ( -86.91 by residue)
QMean score : 0.735
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