Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFPAGFGWAAATAAYQVEGGWDADGKGPCVWDTFTHQGGERVFKNQTGDVACGSYTLWEEDLKCIKQLGLTHYRFSLSWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFDLPQTLEDQGGWLSEAIIESFDKYAQFCFSTFGDRVKQWITINEANVLSVMSYDLGMFPPGIPHFGTGGYQAAHNLIKAHARSWHSYDSLFRKKQKGMVSLSLFAVWLEPADPNSVSDQEAAKRAITFHLDLFAKPIFIDGDYPEVVKSQIASMSQKQGYPSSRLP-EFTEEEKKMIKGTADFFAVQYYTTRLIKYQEN--K----KGE-----LGILQDAEIEFFPDPSWKN--VDWIYVVPWGVCKLLKYIKDTYNNPV-IYITENGFPQSD----PAPLDDTQRWEYFRQTFQELFKAIQLDKVNLQVYCAWSLLDNFEWNQGYSSRFGLFHVDFEDPARPRVPYTSAKEYAKIIRNNGLEAHL |
| 3W53 Chain:A ((43-504)) | FAWPKEFLWGSATAAAQIEGAGHSYGKEDSVWDAFARKEG-AIAGGENLEVAVDHYHRYREDVQLMRELGLDSYRFSTSWARVVPGGR--TVNPEGLDFYSRLVDELLENGILPWLTLYHWDLPQALEERGGWTNRETSYKFLEYAETVHEKLGDRVKHWTTFNEPLCSSLIGYAAGEHAPGRQEP-QAALAAVHHQHLAHGLATARLRE----LGAEHIGITLNLTNAVPNNPGDPVDLEAARRVDALWNRMYLDPVL-RGSYPEDLLEDVQGL----G-----LAEVIEAGDLEIISQPIDFLGVNHYHDDNVSGHPLPAGQPQPVVPTDSPKSSPFVGSEYVTFPARDLPRTAMGW-EVNPEGLRVLLNRLNQDYANLPSLYITENGASYTDTVTEAGTVEDPEREEYILNHLDAVVRAIA-DGVDVRGYFVWSLLDNFEWAWGYAKRFGIIHVDYQT--QVRTIKNSGKAYAGLIAANRT---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3W53.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -239888 for 4014 contacts (-59.8/contact) +
2D Compatibility (PS) -46886 + (NN) -12095 + (LL) 1612
1D Compatibility (HY) -26000 + (ID) 7500
Total energy: -330757.0 ( -82.40 by residue)
QMean score : 0.537
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