Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------MTNLNASQANHRNFILTGIPGTPDKNPWLAFPLGFLYTLTLLGN-GTILAVIKVEPSLHEPTYYFLSILALTDVSL-----SMSTLPS----MLSIYWFNAP----------------------QIVFDACIMQ---MFFIHVFGIVESG--------VLVSMAFDRFVAIRNPLHYVSILTHDVIRKTGIAVL-TRAVCVVFPVPFLIKCLPFCHSNVLSHSYCLHQNMMRLA------CASTRINSL--YGLIVVIFTLGLDVLLTLLSYVLTLKTVLGIVSRGERLKTLSTCLSHMSTVLLFYVPFM----GAASMIHRFWEHLSPVV-----HMVMADIYLLLPP------------VLNPIVY------SVKTKQI |
| 4U6D Chain:A ((28-409)) | EGFPFILPKEKPNRPLSAAMQRNYDNYMAPRPENNELYTQFKYTELKGFDYNGHDGTISRRDPSKVIYENGKYYVWYTYRNTPTPPQGAKNSNDTIPSADWDLAEIWYATSKDGFTWEEQGVAVPRPPKPNVGWRSVTTTDILKWKGKFYLYYQGFMEASGTRGDDCPVAVSYA-------DSPDGPWTPHTEVVIPNGKKGEWDQYSIHDPYPIVYKDKIYLYYKSDFDGDPNLVRMQGLAIADNPLGPFKKSPLNPVINSGHETTLFPFK-EGMAALVIRDGTEHNTVQYAEDGVNFNIASI-VEFMPNAAGPYVADAFTNTKYGRGISWGISHFTNATTWDQNHAVLARFDCDLSLDVDDPHMKRLGTYFKPEFYYQMGLSKKQRERI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U6D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -352021 for 2265 contacts (-155.4/contact) +
2D Compatibility (PS) -31048 + (NN) 8067 + (LL) 1060
1D Compatibility (HY) -3200 + (ID) 2800
Total energy: -379942.0 ( -167.74 by residue)
QMean score : 0.155
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