Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLGLNGTPFQPATLQLTGIPGIQTGLTWVALIFCILYMISIVGNLSILTLVFWEPALHQPMYYFLSMLALNDLGVSFSTLPTVISTFCFNYNHVAF----NACLVQMFFIHTFSFMESGILLAMSLDRFVAICYPLRYVTVLTHNRILAMGLGILTKSFTTLFPFPF---VVKRLP---FCKGN---------------VLHHSYCLHPDLMKVACGDIHVNNIYGLLVIIFTY------------------GMDSTFILLSYALILRAMLVIISQEQRLKALNTCMSHICAVLAFYVPIIAVSMIHRFWKSAPP-----------VVHVMMSNVYLFVPPMLNPIIYSVKTKEIRKGILKFFHKSQA |
4XNV Chain:A ((38-382)) | --------SFKCALTKTGF-----QFYYLPAVYILVFIIGFLGN----SVAIWMFVFHMKPWSGISVYMFNLALADFLYVLTLPALIFYYFNKTDWIFGDAMCKLQRFIFHVNLYGSILFLTCISAHRYSGVVYP-KSLGRLKKKNAICISVLVWLIVVVAISPILFYSGTGVRKNKTITCYDTTSDEYLRSYFIYSMCTTVAMFCVPLVLILGCYGLIVRALIYKMKKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIVCPLCGVGKDQFEEVEEPLRRKSIYLVIIVLTVFAVSYIPFHVMKTMNLRARLDFQTPAMCAFNDRVYATYQVTRGLASLNSCVNPILYFLAGDTFRRR---------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4XNV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -217658 for 2036 contacts (-106.9/contact) +
2D Compatibility (PS) -28920 + (NN) -5210 + (LL) 1868
1D Compatibility (HY) -18400 + (ID) 2300
Total energy: -270620.0 ( -132.92 by residue)
QMean score : 0.068
|
|
|