Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MPSASAMII----FNLSSYNPGP------FILVGIPGLEQFHVWIGIPFCIIYIVAVVGNCILLYLIVVEHSLHEPMFFFLSMLAMTDLILSTAG-VPKALSIFWLGAREITFPGCLTQMFFLHY-NFVLDSAILMAMAFD---HYVAI----CSPLRYTTILTPKTIIKSAMGISFRSFCIILPDVFLLTCLPFCRTRIIPHTYCE---HIGVAQLACADISINFWYGFCVPIMTVISDVILIAVSYAHILCAVFGLPSQDACQKALGTCGSHVCVILMFYTPAF----FSILAHRFGHNVSRTFHIMFANLYIVIPPALNPMVYG--VKTKQIRDKVILLFSKGTG- |
| 5AHR Chain:A ((1-343)) | SMTCPFYKKIPGTGFTVDAFQYGVVEGCTAYFLTHFHSDHYAGLSKHFTF-PVYCSEITGNLLKNKLHVQEQYIHPLPLDTECIVNGVKVVLLDANHCPGAVMILFY------LP---NGTVILHTGDFRADPSMERSLLADQKVHMLYLDTTYCSP--EYTFPSQQEVIRFAINTAFEAVTLNPHALVVCGTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPEINSLITTDMCSSLVHLLPMMQI--------NFKGLQSHLKKCGGKYNQILAFRPTVIPQTKGNISIYGIPYSEHSSYLEMKRFVQWLKPQKIIPTVNVGTWKSRSTMEKYFREWKLEAGY |
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General information:
TITO was launched using:
| RESULT:
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Template: 5AHR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -389143 for 2284 contacts (-170.4/contact) +
2D Compatibility (PS) -31339 + (NN) 1393 + (LL) 1388
1D Compatibility (HY) -12800 + (ID) 2600
Total energy: -433101.0 ( -189.62 by residue)
QMean score : 0.125
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