Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------MLGPAYNHTMETPASFLLVGIPGLQSSHLWLAISLSAMYITA------------------------------LLGNTLIVTAIWMDSTRHEP-------MYCFLCVLAAV-----DIVMASSVVPKMVSIFC---------SGDSSISFSACFTQMFFVHLATAV--------ETGLLLTMAFDRYVAICKPL---HYKRILTPQVMLGMSM-AVTIRAVTFMTPLSWMMNHLPFCGSNVVVHSYCKHIA----LAR----LACADPV----PSSLYSLI--GSSLMVGSDVAFIAA---SYILILRAVFDLSSKTAQLKALSTCG------SHVGVMALYYL-----------------------PGMASIYAAWLGQDIVPLHTQVLLADLY----VIIPATLNPIIYGMRTKQLLEGIWSYLMHFL-------------FDHSNLGS---------- |
| 2Q06 Chain:A ((22-496)) | ATEIRASVGRMVGGIGRFYIQMCTEL------KLSDQEGRLIQNSITIERMVLSAFDERRNRYKDPKKTGGPIYRRRDGKWVRELILYDKEEIRRIWRQANNGEDATAGLTHMMIWHSNLNDATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAIKGVGTMVMELIRMIKRGINDRNFWRGENGRRTRIAYERMCNILKGKFQTAAQKAMMDQVRESRNPGNAEIEDLIFLARSALILRGSIAHKSCLPACVYGLAVASGYDFEREGYSLVGIDPFRLLQNSQVFSLIRPNENPAHKSQLVWMACHSAAFEDLRVSSFIRGTRVIPRGQLSTRGVQIASNENVEAMDSSTLELRSRYWAIRTRSGGNTNQQRASAGQISVQPTFSVQRNLPFERATIMAAFKGNTEGRTSDMRTEIIRMMESARPEDVSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAEEY |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Q06.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -265162 for 2140 contacts (-123.9/contact) +
2D Compatibility (PS) -32589 + (NN) 2326 + (LL) 792
1D Compatibility (HY) -4400 + (ID) 3050
Total energy: -302083.0 ( -141.16 by residue)
QMean score : 0.055
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