Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSYFPILFFFFLKRCPSYTEPQNLTGVSEFLLLGLSEDPELQPVLAGLFLSMYLVTVLGNLLIILAVSSDSHLHTPMYFFLSNLSLADIGFTSTTVPKMIVDMQTHSRVISYEGCLTQMSFFVLFACMDDMLLSVMAYDRFVAICHPLHYRIIMNPRLCGFLILLSFFISLLDSQLHNLIMLQLTCFKDVDISNFFCDPSQLLHLRCSDTFINEMVIYFMGAIFG--CLPISGILFSYYKIVSPILRVPTSDGKYKAFSTCG------------------SHLAVVCLFYGTGLVGYLSSAVLPSPRKSMVASVMYTVVTP-------MLNPFIYSLRNKDIQSALCRLHGRIIKSHHLHPFCYMG-------------------
4XNV Chain:A ((38-382))-----------SFKCA------------------LTKTGFQFYYLPAVYILVFIIGFLGNSVAIWMFVFHMKPWSGISVYMFNLALADFLYVLTLPALIFYYFNKTDWIFGDAMCKLQRFIFHVNLYGSILFLTCISAHRYSGVVYPKSLGRLKKKNAICISVLVWLIVVVAIS-----PILFYSGTGVRKNKTITCYDT------TSDEYLRSYFIYSMCTTVAMFCVPLVLILGCYGLIVRALIY---KMKKYTC-TVCGYIYNPEDGDPDNGVNPGTDFKDIVCPLCGVGKDQFEEVEE-PLRRKSIYLVIIVLTVFAVSYIPFHVMKTMNLRARLDFQTPAMCAFNDRVYATYQVTRGLASLNSCVNPILYFLAGDTFRRR


General information:
TITO was launched using:
RESULT:

Template: 4XNV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -208402 for 1994 contacts (-104.5/contact) +
2D Compatibility (PS) -29917 + (NN) -1695 + (LL) 3744
1D Compatibility (HY) -23200 + (ID) 2600
Total energy: -262070.0 ( -131.43 by residue)
QMean score : 0.205

(partial model without unconserved sides chains):
PDB file : Tito_4XNV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4XNV-query.scw
PDB file : Tito_Scwrl_4XNV.pdb: