Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSYFPILFFFFLKRCPSYTEPQNLTGVSEFLLLGLSEDPELQPVLAGLFLSMYLVTVLGNLLIILAVSSDSHLHTPMYFFLSNLSLADIGFTSTTVPKMIVDMQTHSRVISYEGCLTQMSFFVLFACMDDMLLSVMAYDRFVAICHPLHYRIIMNPRLCGFLILLSFFISLLDSQLHNLIMLQLTCFKDVDISNFFCDPSQLLHLRCSDTFINEMVIYFMGAIFG--CLPISGILFSYYKIVSPILRVPTSDGKYKAFSTCG------------------SHLAVVCLFYGTGLVGYLSSAVLPSPRKSMVASVMYTVVTP-------MLNPFIYSLRNKDIQSALCRLHGRIIKSHHLHPFCYMG------------------- |
4XNV Chain:A ((38-382)) | -----------SFKCA------------------LTKTGFQFYYLPAVYILVFIIGFLGNSVAIWMFVFHMKPWSGISVYMFNLALADFLYVLTLPALIFYYFNKTDWIFGDAMCKLQRFIFHVNLYGSILFLTCISAHRYSGVVYPKSLGRLKKKNAICISVLVWLIVVVAIS-----PILFYSGTGVRKNKTITCYDT------TSDEYLRSYFIYSMCTTVAMFCVPLVLILGCYGLIVRALIY---KMKKYTC-TVCGYIYNPEDGDPDNGVNPGTDFKDIVCPLCGVGKDQFEEVEE-PLRRKSIYLVIIVLTVFAVSYIPFHVMKTMNLRARLDFQTPAMCAFNDRVYATYQVTRGLASLNSCVNPILYFLAGDTFRRR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XNV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -208402 for 1994 contacts (-104.5/contact) +
2D Compatibility (PS) -29917 + (NN) -1695 + (LL) 3744
1D Compatibility (HY) -23200 + (ID) 2600
Total energy: -262070.0 ( -131.43 by residue)
QMean score : 0.205
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