Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEGFYLRRSHELQGMGKPGRVNQTTVSDFLLLGLSEWPEEQPLLFGIFLGMYLVTMVGNLLIILAISSDPHLHTPMYFFLANLSLTDACFTSASIPKMLANIHTQSQIISYSGCLAQLYFLLMFGGLDNCLLAVMAYDRYVAICQPLHYSTSMSPQLCALMLG---------------VCWVLTNCPALMHTLLLTRVAFC----AQKAIPH---------FYCDP---SALLKLACSDTHVNELMI--------ITMGLLFLTVPLLLI---------VFSYVRIFWAVFVISSPGGRWKAFSTCGSHLTVVLLFYGSLMGVYLLPPSTYSTERESRAAVLYMVIIPTLNPFIYSLRNRDMKEALGKLFVSGKTFFL |
| 3J7W Chain:A ((2-344)) | ------ASMTGGQQMGTNQGKGVVAAGDKLALFLKVFGGEVLTAFA------RTSVTTSRHMVRSISSGKSAQFPVLGRTQAAYLAPG----ENLDDKRKDIKHTEKVITIDGLLTADVLIYDIEDAMNHYDVRSEYTSQLGESLAMAADGAVLAEIAGLCNVESKYNENIEGLGTATVIETTQNKAALTDQVALGKEIIAALTKARAALTKNYVPAADRVFYCDPDSYSAILAALMPNAANYAALIDPEKGSIRNVMGFEVVEVPHLTAGGAGTAREGTTGQKHVF--------PANKGEGNVKVAKDNVIGLFMHRSAVGTVKLRD--LALERARRANFQADQIIAKYAMGHGGLR----PEAAGAVVFKV----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J7W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -230774 for 1793 contacts (-128.7/contact) +
2D Compatibility (PS) -30726 + (NN) 4110 + (LL) 3088
1D Compatibility (HY) -1600 + (ID) 2950
Total energy: -258852.0 ( -144.37 by residue)
QMean score : 0.058
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