Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------MGENQTMVTEFLLLGF--LLGPRIQMLLFGLFSLFYIFTLLGNGAILGLISLDSRLHTPMYFFLSHLAVVDIAYTRNTVPQMLANLLHPAKPISFAGCMTQTFLCLSFGHSECLLLVLMSYDRYVAICHPLRYSVIMTWRVCITLAVTSWTCGSLLALAHVVLILRLPFSGPHEINHFFCEILSVLRLACA-------DTWLNQVVIFAACVFFLVGPPSLVLVSYSHILAAILRI----QSGEGRRKAFSTCSSHLCVVGLFFGSAIIMY-------MAPKSRHPEEQQKVFFLFYSFFNPTLNPLIYSLRNGEVKGALRRAL-------GKESHS-------------- |
| 1U19 Chain:A ((4-349)) | MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMS-NFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEG--------------MQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U19.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -220658 for 2318 contacts (-95.2/contact) +
2D Compatibility (PS) -29202 + (NN) 3465 + (LL) 1236
1D Compatibility (HY) 2800 + (ID) 700
Total energy: -243059.0 ( -104.86 by residue)
QMean score : 0.130
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